Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011414.1 Corchorus capsularis cultivar CVL-1 contig11435, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22727

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1453--1498
3
15.3
3
90
0
74
71
28
0
0
0.86
2378--2457
32
2.4
34
89
8
119
21
17
15
46
1.84
2811--2842
5
6.4
5
100
0
64
21
0
0
78
0.76
5332--5361
15
2.0
15
93
0
51
43
0
23
33
1.54
5313--5436
60
2.0
61
89
1
187
41
1
24
33
1.65
6167--6209
21
2.0
21
81
0
50
9
16
32
41
1.80
8891--8935
21
2.1
21
87
0
63
17
37
11
33
1.85
9489--9533
23
2.0
22
82
4
54
51
4
4
40
1.42
9523--9561
14
2.8
14
96
0
69
43
7
0
48
1.31
11150--11191
20
2.0
20
86
4
57
52
19
4
23
1.65
11307--11365
14
4.6
14
70
20
56
50
1
0
47
1.11
11306--11382
35
2.1
38
86
11
108
48
3
0
48
1.20
11824--11872
2
26.0
2
80
12
59
48
0
0
51
1.00
18392--18459
29
2.3
29
85
5
75
33
0
11
54
1.37
21059--21108
25
2.0
26
88
7
77
48
10
24
18
1.78

Tables:   1

The End!