Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011415.1 Corchorus capsularis cultivar CVL-1 contig11436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45176

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3622--3664
21
2.0
21
95
0
77
25
34
16
23
1.95
16336--16363
12
2.3
12
100
0
56
28
35
28
7
1.84
25925--25951
12
2.2
12
100
0
54
40
0
7
51
1.30
35363--35389
2
13.5
2
100
0
54
48
0
0
51
1.00
35709--35742
15
2.3
15
90
10
52
17
2
0
79
0.86
38065--38104
6
6.8
6
82
5
55
5
30
30
35
1.79
40758--40827
29
2.4
30
87
2
97
20
12
30
37
1.90

Tables:   1

The End!