Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011416.1 Corchorus capsularis cultivar CVL-1 contig11437, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31275

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8949--8982
18
1.9
17
88
5
50
52
20
5
20
1.67
21016--21042
6
4.5
6
100
0
54
33
0
14
51
1.43
21517--21574
27
2.1
27
90
0
89
24
13
31
31
1.94
21524--21577
27
2.0
27
100
0
108
18
11
37
33
1.86
27833--27876
21
2.1
21
83
8
54
18
31
9
40
1.81
28183--28269
33
2.6
33
87
3
122
11
29
41
17
1.84
31244--31274
2
15.5
2
100
0
62
51
0
0
48
1.00

Tables:   1

The End!