Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011417.1 Corchorus capsularis cultivar CVL-1 contig11438, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38302

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3011--3066
25
2.2
25
83
6
67
53
10
21
14
1.70
9509--9564
27
2.2
24
82
14
69
37
0
7
55
1.27
9517--9591
29
2.7
28
89
6
116
38
1
9
50
1.43
18199--18227
12
2.3
13
94
5
51
0
24
0
75
0.80
18583--18610
2
14.0
2
100
0
56
50
0
0
50
1.00
22525--22562
19
2.0
19
94
0
67
23
18
5
52
1.65
25076--25138
32
2.0
32
87
3
92
14
25
25
34
1.94
34225--34540
161
2.0
159
87
2
463
33
19
14
32
1.92
35398--35445
21
2.3
21
85
0
60
33
22
37
6
1.80

Tables:   1

The End!