Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011422.1 Corchorus capsularis cultivar CVL-1 contig11443, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  106976

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
439--463
2
12.5
2
100
0
50
48
0
0
52
1.00
8163--8190
1
28.0
1
100
0
56
0
0
0
100
0.00
17058--17123
32
2.1
31
82
2
78
21
19
21
37
1.94
22680--22734
23
2.4
23
93
0
92
38
14
18
29
1.90
29636--29776
48
2.9
48
95
0
246
24
12
36
27
1.91
33957--33990
2
17.0
2
100
0
68
50
0
0
50
1.00
39034--39064
1
31.0
1
100
0
62
100
0
0
0
0.00
50854--50894
19
2.2
19
95
0
73
39
19
2
39
1.65
77790--77929
75
1.9
75
95
0
253
28
24
20
27
1.99
78123--78263
76
1.9
76
96
0
264
20
20
27
31
1.98
79110--79164
6
9.2
6
81
0
65
20
58
20
1
1.49
80567--80627
24
2.6
24
89
7
90
37
1
19
40
1.62
82302--82411
56
2.0
56
90
0
175
19
20
30
29
1.97

Tables:   1

The End!