Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011439.1 Corchorus capsularis cultivar CVL-1 contig11460, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23361

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9495--9534
17
2.4
17
87
8
55
25
2
12
60
1.45
12849--12898
5
10.2
5
93
4
84
38
0
2
60
1.09
19442--19483
22
1.9
22
90
0
66
28
2
4
64
1.26
21995--22019
4
6.2
4
100
0
50
76
0
24
0
0.80
22943--22974
15
2.1
15
100
0
64
31
6
6
56
1.49
23333--23360
2
14.0
2
100
0
56
50
0
0
50
1.00

Tables:   1

The End!