Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011440.1 Corchorus capsularis cultivar CVL-1 contig11461, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22614

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8614--8685
29
2.4
32
77
11
80
30
18
18
33
1.94
8863--8901
18
2.2
18
86
9
53
51
10
5
33
1.58
12440--12516
35
2.2
35
80
0
91
27
20
28
23
1.99
13779--13858
40
2.0
40
90
4
126
33
18
22
25
1.97
16515--16550
2
18.0
2
94
0
63
50
2
0
47
1.15
16618--16662
16
2.8
17
76
13
58
8
15
35
40
1.79
18227--18285
18
3.0
20
87
9
95
38
5
0
55
1.22
18232--18293
20
3.2
19
76
10
56
40
4
1
53
1.32
18439--18479
21
2.0
21
95
0
73
34
17
19
29
1.94
18822--18900
29
2.7
29
92
2
131
39
15
27
17
1.90
19944--19977
16
2.2
16
89
5
52
61
8
0
29
1.26

Tables:   1

The End!