Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011443.1 Corchorus capsularis cultivar CVL-1 contig11464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50395

Tables:   1   

This is table  1  of  1  ( 23 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6349--6788
215
2.0
215
94
3
763
28
16
13
41
1.86
7224--7249
10
2.6
10
100
0
52
92
0
7
0
0.39
7772--7811
11
3.6
11
82
0
53
47
7
5
40
1.54
7765--7811
22
2.1
22
88
0
67
44
8
4
42
1.54
8675--8710
16
2.2
16
95
0
63
58
27
13
0
1.36
10334--10387
27
2.0
27
82
13
67
18
12
16
51
1.75
11681--11715
2
17.5
2
100
0
70
51
0
0
48
1.00
13802--13827
5
5.2
5
100
0
52
19
0
19
61
1.35
13747--13888
72
2.0
71
79
8
153
26
10
23
39
1.87
13815--13991
99
1.8
94
84
8
239
24
11
24
38
1.88
14114--14168
26
2.1
26
82
0
65
29
18
12
40
1.87
14078--14301
91
2.5
91
90
0
349
30
20
13
35
1.92
14346--14378
16
2.1
16
100
0
66
12
27
18
42
1.85
17631--17687
22
2.6
22
88
0
87
31
15
7
45
1.73
21229--21297
24
2.8
25
86
4
88
17
31
27
23
1.97
21587--21626
2
20.0
2
94
0
71
50
2
0
47
1.14
23803--23946
27
5.3
27
88
0
198
21
18
38
22
1.94
25649--25697
26
1.9
26
88
12
75
26
24
34
14
1.94
25858--26279
232
1.8
232
83
6
559
32
23
21
22
1.98
25858--26336
232
2.1
231
81
4
554
30
23
21
23
1.99
32108--32168
30
2.0
30
93
0
104
50
6
29
13
1.66
33254--33288
18
1.9
18
88
0
52
5
37
11
45
1.64
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44432--44471
21
1.9
21
89
0
62
60
10
17
12
1.59

Tables:   1

The End!