Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011452.1 Corchorus capsularis cultivar CVL-1 contig11473, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48944

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13005--13098
32
2.9
32
76
6
84
17
9
32
40
1.81
13200--13237
20
1.9
20
88
0
58
36
5
2
55
1.37
13268--13350
31
2.6
32
84
3
114
8
12
26
53
1.66
13256--13349
16
6.1
16
82
10
99
7
12
29
50
1.68
17622--17655
2
18.0
2
88
11
54
50
0
0
50
1.00
23306--23348
6
7.0
6
91
2
68
2
65
13
18
1.38
25399--25457
30
2.0
30
86
6
84
23
28
16
30
1.97
25800--25913
33
3.6
32
82
3
133
40
16
9
33
1.81
27445--27477
12
2.5
14
90
9
52
12
0
3
84
0.72
29369--30023
35
18.7
35
88
5
923
33
16
10
39
1.84
29368--30023
105
6.2
105
91
0
1033
33
16
10
39
1.84
37709--37783
37
2.0
37
92
0
123
26
20
22
30
1.98

Tables:   1

The End!