Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011453.1 Corchorus capsularis cultivar CVL-1 contig11474, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29335

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2910--3344
217
2.0
217
99
0
861
28
16
19
35
1.93
9849--9899
24
2.1
24
100
0
102
39
7
17
35
1.79
13781--13809
14
2.1
14
100
0
58
37
34
6
20
1.80
15052--15111
11
5.7
11
75
18
56
40
1
18
40
1.60
27825--27890
31
2.1
31
86
5
89
27
19
4
48
1.68
28196--28238
19
2.1
21
84
16
56
27
6
2
62
1.33
28631--28697
22
3.1
21
76
16
57
35
8
16
38
1.80
28726--28774
22
2.2
22
85
0
62
26
6
24
42
1.78
28810--28870
24
2.7
23
78
9
63
37
9
16
36
1.82
28841--28982
56
2.5
56
97
0
266
35
8
16
38
1.80
29020--29274
22
11.6
23
72
14
139
41
10
14
33
1.80
29083--29246
66
2.5
66
77
11
169
42
9
13
34
1.77

Tables:   1

The End!