Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011459.1 Corchorus capsularis cultivar CVL-1 contig11480, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33963

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
897--982
33
2.6
33
85
8
106
24
39
25
10
1.87
897--1010
30
3.6
30
79
11
104
24
36
26
12
1.91
7851--7994
72
2.0
72
100
0
288
25
15
18
41
1.89
14878--15058
89
2.0
89
95
0
326
30
17
19
32
1.95
15653--15890
107
2.3
104
87
5
338
42
8
9
39
1.68
25332--25390
19
3.2
19
70
29
56
42
10
0
47
1.37
26458--26519
31
2.0
31
93
0
106
27
35
8
29
1.85
26504--26537
15
2.3
15
100
0
68
17
26
14
41
1.88
28697--28730
17
2.1
16
94
5
59
55
0
14
29
1.40
31273--31327
20
2.6
22
80
11
71
45
5
36
12
1.66
32047--32096
17
2.9
17
93
0
82
50
4
10
36
1.55

Tables:   1

The End!