Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011475.1 Corchorus capsularis cultivar CVL-1 contig11496, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18239

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5089--5116
2
14.0
2
100
0
56
50
0
0
50
1.00
14099--14123
2
12.5
2
100
0
50
48
0
0
52
1.00
14647--14714
32
2.2
33
92
7
115
25
0
20
54
1.45
15587--15632
14
3.4
14
80
17
60
82
0
17
0
0.67
15588--15630
15
2.9
15
86
10
61
83
0
16
0
0.64
15589--15632
13
3.3
13
84
15
63
84
0
15
0
0.63
16526--16768
116
2.1
113
83
3
308
26
18
20
35
1.95

Tables:   1

The End!