Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011477.1 Corchorus capsularis cultivar CVL-1 contig11498, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16788

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--37
2
18.5
2
100
0
74
51
0
0
48
1.00
440--481
22
1.9
22
85
9
59
50
0
7
42
1.30
2062--2090
1
29.0
1
100
0
58
100
0
0
0
0.00
2270--2428
84
1.9
85
88
9
243
45
7
19
27
1.77
4227--4307
27
3.2
26
64
25
66
30
11
6
51
1.62
4226--4320
48
2.0
48
97
0
181
33
9
6
50
1.60
5074--5099
12
2.2
12
100
0
52
23
11
7
57
1.59
6103--6127
2
12.5
2
100
0
50
48
0
0
52
1.00
7615--7639
2
12.5
2
100
0
50
0
0
48
52
1.00
8536--8561
13
2.0
13
100
0
52
53
0
0
46
1.00
10059--10087
15
1.9
15
100
0
58
62
3
0
34
1.12
16163--16212
20
2.8
16
76
23
55
26
14
4
56
1.56

Tables:   1

The End!