Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011479.1 Corchorus capsularis cultivar CVL-1 contig11500, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19340

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11931--11955
2
12.5
2
100
0
50
52
0
0
48
1.00
12464--12841
87
4.3
87
89
2
533
25
15
18
40
1.90
12645--12775
23
6.0
21
66
15
61
22
16
21
38
1.92
12645--12687
21
2.0
21
86
9
59
23
16
20
39
1.92
12734--12788
23
2.5
22
85
11
69
16
16
27
40
1.89
12326--12832
262
1.9
265
86
6
724
25
16
18
40
1.91
12463--12841
175
2.2
174
87
3
537
25
15
18
40
1.89
12755--12905
66
2.3
66
89
2
234
23
15
19
42
1.88
12819--12983
87
1.9
87
81
7
201
25
14
20
39
1.91
12652--12983
153
2.2
154
82
5
431
24
15
19
40
1.91
14180--14216
19
1.9
19
94
0
65
16
24
2
56
1.53
15402--15428
2
13.5
2
100
0
54
51
0
0
48
1.00
19212--19326
36
3.2
37
88
3
171
29
20
10
40
1.85

Tables:   1

The End!