Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011480.1 Corchorus capsularis cultivar CVL-1 contig11501, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22126

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1141--1178
18
2.1
19
90
5
60
23
10
18
47
1.79
2188--2244
14
4.1
14
75
4
53
45
5
12
36
1.64
2188--2245
27
2.1
27
93
0
98
44
5
12
37
1.64
5384--5439
27
2.0
28
83
10
71
51
25
10
12
1.71
6081--6119
20
1.9
21
94
5
71
30
0
7
61
1.24
6755--6779
13
1.9
13
100
0
50
40
0
0
60
0.97
10341--10368
2
14.0
2
100
0
56
0
50
0
50
1.00
18880--18909
11
2.7
11
94
0
51
0
13
0
86
0.57

Tables:   1

The End!