Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011482.1 Corchorus capsularis cultivar CVL-1 contig11503, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34338

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5329--5408
28
2.8
28
84
5
97
26
23
12
37
1.90
6097--6154
29
2.0
29
89
0
89
46
13
15
24
1.82
6730--6767
11
3.5
11
89
10
51
39
0
2
57
1.12
6942--6969
2
14.0
2
100
0
56
50
0
0
50
1.00
9680--9732
23
2.4
21
76
14
54
45
0
1
52
1.11
11029--11069
21
2.0
21
85
0
55
31
31
9
26
1.89
11365--11413
14
3.4
14
77
5
53
34
8
0
57
1.29
11681--11839
86
1.9
85
83
1
210
33
9
3
52
1.52
11833--11868
13
2.6
14
91
4
56
38
0
2
58
1.13
11844--11935
46
2.0
48
81
12
111
40
3
2
54
1.29
16593--16662
21
3.3
21
91
0
113
21
31
21
25
1.98
18846--19078
33
7.3
32
63
15
117
24
24
11
40
1.87
18802--19105
63
4.8
63
92
0
455
23
23
11
41
1.87
18942--19135
31
6.2
30
69
16
126
24
25
10
39
1.87
19005--19178
94
1.9
93
92
3
296
24
24
11
39
1.88
22006--22034
14
2.0
15
93
6
51
58
0
41
0
0.98
22786--23232
35
12.7
35
85
5
546
38
9
18
33
1.82
22782--23232
178
2.6
176
88
6
648
38
9
18
33
1.82
24678--25956
639
2.0
638
96
0
2369
31
26
14
26
1.95
32941--33071
62
2.1
62
90
4
201
30
8
29
31
1.87
33800--33824
2
12.5
2
100
0
50
0
0
48
52
1.00
33830--33869
2
20.0
2
100
0
80
50
0
0
50
1.00

Tables:   1

The End!