Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011483.1 Corchorus capsularis cultivar CVL-1 contig11504, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31881

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1091--1137
22
2.1
23
88
4
69
57
8
2
31
1.41
1393--1436
21
2.1
21
91
0
70
31
9
40
18
1.81
2717--2754
14
2.8
14
88
4
60
60
5
13
21
1.52
3123--3166
21
2.1
21
95
0
79
36
9
15
38
1.80
4810--4842
2
16.5
2
100
0
66
51
0
0
48
1.00
5121--5929
324
2.5
324
91
1
1293
37
15
14
32
1.88
14513--14601
45
2.0
45
93
0
151
33
19
21
25
1.97
16020--16052
3
11.0
3
100
0
66
66
0
0
33
0.92
17565--17611
25
1.9
24
91
4
76
23
10
21
44
1.83
17800--17851
22
2.4
22
83
3
61
26
7
17
48
1.74
18556--18602
22
2.1
23
88
4
69
57
8
2
31
1.41
18567--18616
22
2.3
22
82
6
57
60
6
2
32
1.32
18580--18618
15
2.6
15
83
0
51
56
5
2
35
1.35
18651--18714
32
2.0
33
87
6
96
12
34
31
21
1.91
18655--18725
32
2.2
32
80
5
81
14
35
33
16
1.89

Tables:   1

The End!