Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011493.1 Corchorus capsularis cultivar CVL-1 contig11514, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38978

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3277--3465
85
2.2
85
85
3
247
35
15
19
28
1.93
5901--5933
3
11.0
3
93
0
57
30
66
0
3
1.06
8200--8240
21
1.9
22
85
5
57
24
19
9
46
1.80
8057--8314
22
12.0
21
68
14
134
34
15
10
39
1.81
18530--18563
12
2.8
12
100
0
68
44
41
0
14
1.45
19531--19568
11
3.5
11
85
10
51
57
2
0
39
1.12
24051--24090
21
1.9
21
85
10
55
20
30
20
30
1.97
27631--27724
27
3.5
27
82
5
118
19
18
34
28
1.95
30491--30534
21
2.1
21
95
0
79
36
6
36
20
1.79
37419--37549
70
1.9
70
95
0
235
38
11
3
45
1.58
38247--38279
16
2.1
16
94
0
57
54
21
0
24
1.45

Tables:   1

The End!