Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011495.1 Corchorus capsularis cultivar CVL-1 contig11516, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22106

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
577--850
108
2.5
110
89
5
421
38
11
1
48
1.50
1678--1741
29
2.1
29
88
5
92
31
18
6
43
1.75
5285--5356
37
1.9
37
86
5
101
36
13
23
26
1.93
12824--12900
3
25.7
3
70
10
50
54
0
3
41
1.19
12824--12900
15
5.1
15
81
9
77
54
0
3
41
1.19
13756--13912
74
2.1
74
92
2
262
21
29
8
40
1.83
21488--21536
21
2.3
21
85
0
62
10
32
28
28
1.90

Tables:   1

The End!