Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011496.1 Corchorus capsularis cultivar CVL-1 contig11517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29060

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3348--3377
13
2.3
13
94
0
51
20
16
40
23
1.91
8576--8624
21
2.3
21
85
0
62
10
34
24
30
1.89
9639--9673
15
2.3
15
95
0
61
48
8
20
22
1.76
10303--10370
33
2.1
33
97
0
127
30
20
35
13
1.91
11128--11303
84
2.1
84
82
0
208
33
21
17
27
1.95
11209--11504
99
3.0
98
86
6
391
34
16
17
31
1.93
11392--11422
14
2.1
15
94
5
55
29
0
19
51
1.47
11510--11717
76
2.7
76
84
5
267
27
21
11
39
1.87
11814--11845
15
2.1
15
94
0
55
21
18
9
50
1.75
11919--12109
76
2.5
76
88
0
274
25
22
12
39
1.88
21785--21888
31
3.4
29
70
19
79
32
22
20
25
1.97
21920--21994
31
2.4
31
93
0
132
21
20
20
38
1.93
21982--22052
29
2.4
29
88
0
115
29
18
19
32
1.96
28067--28135
31
2.2
31
92
0
111
30
18
4
46
1.69

Tables:   1

The End!