Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011497.1 Corchorus capsularis cultivar CVL-1 contig11518, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23479

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1602--1687
45
1.9
45
83
4
111
38
16
11
33
1.85
1558--1718
22
7.3
22
71
6
110
39
16
10
33
1.83
1813--1958
22
6.8
21
73
11
84
35
12
10
41
1.77
2239--2348
22
4.9
22
80
6
80
37
19
10
32
1.86
2293--2355
22
2.9
22
95
0
108
31
17
15
34
1.92
2683--2747
30
2.1
31
88
2
96
47
4
18
29
1.68
6556--6640
39
2.2
39
86
0
116
27
24
18
29
1.98
9671--9773
50
2.1
50
100
0
206
20
15
33
31
1.94
10277--10320
22
2.0
23
81
4
54
25
4
9
61
1.45
20335--20372
19
2.0
20
90
10
62
26
31
5
36
1.79

Tables:   1

The End!