Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011501.1 Corchorus capsularis cultivar CVL-1 contig11522, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46999

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3863--4097
119
2.0
119
93
0
398
32
14
16
36
1.89
19533--19567
11
3.2
11
91
0
61
0
22
0
77
0.78
20319--20355
18
2.1
18
85
14
51
21
29
13
35
1.92
26149--26196
19
2.5
19
79
3
51
33
2
18
45
1.61
32322--32364
16
2.6
17
75
10
54
65
13
0
20
1.27
34276--34347
33
2.2
33
94
0
126
38
4
22
34
1.73
37714--37751
18
2.1
18
90
0
58
28
23
18
28
1.98
44548--44573
6
4.3
6
100
0
52
30
19
15
34
1.93

Tables:   1

The End!