Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011510.1 Corchorus capsularis cultivar CVL-1 contig11531, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16892

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--680
41
3.4
41
93
2
224
52
5
20
21
1.65
729--792
32
2.0
33
87
3
94
50
4
18
26
1.67
779--832
26
2.1
26
86
6
74
51
5
16
25
1.66
886--997
22
5.2
22
77
9
108
54
5
19
20
1.63
994--1034
22
1.9
22
90
5
66
53
2
19
24
1.57
953--1033
35
2.3
36
83
10
105
53
3
22
20
1.62
1104--1167
27
2.2
29
81
13
87
62
0
21
15
1.32
3111--3137
2
13.5
2
100
0
54
51
0
0
48
1.00
8380--8421
19
2.2
19
87
8
59
7
19
16
57
1.62
11136--11575
35
12.5
35
87
2
580
37
10
17
35
1.83

Tables:   1

The End!