Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011519.1 Corchorus capsularis cultivar CVL-1 contig11540, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18096

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
773--809
18
2.1
18
100
0
74
45
16
0
37
1.47
776--809
8
4.0
8
85
14
50
47
14
0
38
1.45
2406--2446
21
2.0
21
90
0
64
41
14
17
26
1.88
2865--3026
81
2.0
79
96
2
297
27
12
24
35
1.92
6044--6092
23
2.1
23
96
0
89
36
4
6
53
1.45
6848--6964
41
2.8
41
77
5
119
47
17
15
20
1.83
9722--9826
33
3.2
33
80
0
102
26
10
20
42
1.84
13661--13694
11
3.1
11
91
0
59
44
17
0
38
1.49

Tables:   1

The End!