Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011521.1 Corchorus capsularis cultivar CVL-1 contig11542, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24805

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--71
2
35.5
2
100
0
142
0
50
0
49
1.00
2162--2277
59
1.9
61
84
8
157
31
12
12
42
1.81
3126--3150
2
12.5
2
100
0
50
52
0
0
48
1.00
3541--3625
43
2.0
43
90
0
134
20
12
24
42
1.87
3816--3871
29
1.9
28
82
13
69
0
23
1
75
0.90
5047--5156
55
2.1
53
93
5
186
29
12
9
49
1.72
5423--5455
17
1.9
17
93
0
57
30
18
3
48
1.63
8586--8869
142
2.0
142
100
0
568
23
11
21
42
1.86
12843--12939
33
2.9
33
80
4
106
25
9
20
44
1.81
13336--13398
30
2.1
30
91
5
101
31
15
33
19
1.93
13433--13479
9
5.1
10
85
14
57
25
12
40
21
1.89

Tables:   1

The End!