Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011523.1 Corchorus capsularis cultivar CVL-1 contig11544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52151

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12081--12124
21
2.0
22
95
4
81
52
13
25
9
1.70
16298--16339
18
2.3
18
87
0
57
47
2
21
28
1.63
19615--20150
213
2.5
214
88
2
844
19
21
26
31
1.97
22752--22790
15
2.6
14
84
8
51
25
5
38
30
1.78
23655--23799
36
4.0
36
94
0
263
28
29
24
17
1.97
24463--24593
63
2.1
63
89
0
199
34
11
29
25
1.91
33249--33491
90
2.7
90
83
0
297
27
16
24
31
1.96
33425--33561
70
2.0
70
88
2
204
27
15
23
34
1.94
37566--37641
39
1.9
39
94
0
134
10
14
6
68
1.38
37772--37801
15
2.0
15
100
0
60
40
6
20
33
1.78
39886--39945
29
2.1
29
96
0
111
30
3
21
45
1.68
40794--41008
87
2.5
86
79
8
229
37
25
7
29
1.84

Tables:   1

The End!