Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011528.1 Corchorus capsularis cultivar CVL-1 contig11549, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4364

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
293--337
16
2.8
16
83
10
56
31
53
15
0
1.43
373--466
16
5.9
14
74
19
71
30
37
22
9
1.86
380--468
32
2.8
32
84
6
110
32
34
21
11
1.89
372--466
48
2.0
47
81
6
111
30
37
22
9
1.86
1578--1691
38
3.0
37
75
12
122
37
14
16
30
1.89

Tables:   1

The End!