Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011542.1 Corchorus capsularis cultivar CVL-1 contig11563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12375

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7508--7541
2
17.0
2
100
0
68
50
0
0
50
1.00
7856--7896
20
2.0
21
85
4
57
36
2
12
48
1.54
8049--8081
17
2.0
17
94
5
59
45
12
0
42
1.41
8241--8668
170
2.5
166
85
3
545
39
16
14
29
1.88
9766--9803
18
2.1
18
95
0
67
28
10
34
26
1.90

Tables:   1

The End!