Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011543.1 Corchorus capsularis cultivar CVL-1 contig11564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6665

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4710--4735
13
2.0
13
100
0
52
38
0
15
46
1.46
5465--5544
33
2.4
33
95
0
142
10
21
5
63
1.44
5465--5554
33
2.7
33
84
3
92
12
20
4
63
1.45
5572--5658
11
7.5
11
68
23
54
18
11
3
66
1.37
5609--5687
30
2.8
29
79
11
83
15
13
0
70
1.16
5807--5853
23
2.0
23
83
4
58
27
2
34
36
1.69
5702--6650
216
4.3
220
88
3
1348
36
8
20
35
1.82
5702--6603
442
2.1
433
90
2
1405
35
7
20
35
1.82

Tables:   1

The End!