Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011544.1 Corchorus capsularis cultivar CVL-1 contig11565, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46832

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
153--198
16
3.1
16
70
23
55
76
0
15
8
1.02
179--219
19
2.2
19
86
0
55
73
0
14
12
1.11
2637--2669
3
11.0
3
100
0
66
33
33
0
33
1.58
10477--10531
25
2.2
25
96
0
101
18
23
1
56
1.51
15045--15108
34
1.9
32
84
12
85
46
31
10
10
1.74
24348--24521
89
2.0
89
85
3
237
50
12
3
33
1.56
25612--25988
66
5.7
66
83
6
379
41
16
18
22
1.90
29465--29559
42
2.3
42
94
1
165
50
12
6
30
1.65
35883--35917
18
1.9
18
88
0
52
5
22
8
62
1.45
45169--45206
13
3.1
13
85
14
62
21
5
23
50
1.69
45164--45202
11
3.4
11
86
13
60
20
2
25
51
1.60

Tables:   1

The End!