Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011548.1 Corchorus capsularis cultivar CVL-1 contig11569, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35170

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
248--278
16
2.0
15
93
6
53
12
38
35
12
1.82
20478--20583
30
3.5
30
79
5
124
26
17
34
20
1.95
28835--28879
21
2.1
21
91
0
72
17
35
11
35
1.86
29107--29190
32
2.6
32
84
3
107
11
36
41
9
1.75
29267--29380
33
3.5
32
81
11
117
12
42
34
11
1.78
31758--31829
33
2.2
33
95
2
128
12
29
43
15
1.83

Tables:   1

The End!