Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011549.1 Corchorus capsularis cultivar CVL-1 contig11570, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26093

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2572--2617
22
2.1
22
83
0
56
21
8
21
47
1.77
3082--3174
32
2.9
31
81
9
107
17
9
35
37
1.82
3102--3162
16
3.9
15
83
10
77
18
8
37
36
1.80
3330--3397
16
4.2
16
75
0
64
7
11
27
52
1.64
3373--3406
16
2.1
16
100
0
68
11
11
26
50
1.73
4423--4448
1
26.0
1
100
0
52
0
0
0
100
0.00
14208--15508
658
2.0
643
95
2
2332
29
17
14
38
1.90
17714--17778
21
3.0
21
82
6
60
46
6
4
43
1.49
17733--17780
21
2.3
21
88
0
69
43
6
6
43
1.54
19411--19554
58
2.5
58
96
0
261
28
21
9
40
1.83
19590--20037
35
12.7
35
88
3
603
32
18
10
38
1.85
23424--23449
13
2.0
13
100
0
52
38
15
15
30
1.88
24253--24369
60
2.0
60
100
0
234
22
39
23
15
1.92
24739--24767
14
2.1
14
100
0
58
51
20
6
20
1.70

Tables:   1

The End!