Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011557.1 Corchorus capsularis cultivar CVL-1 contig11578, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27568

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1177--1225
14
3.5
14
86
5
64
48
0
0
51
1.00
1162--1223
12
5.2
12
73
19
51
51
0
0
48
1.00
2058--2091
17
2.0
17
88
0
50
79
11
8
0
0.94
3798--3888
29
3.2
29
80
1
112
31
25
24
18
1.97
4310--4341
16
2.0
16
93
0
55
40
0
21
37
1.54
7277--7301
6
4.2
6
100
0
50
32
32
0
36
1.58
20038--20077
6
6.5
6
82
5
53
82
2
15
0
0.77
25638--25688
17
3.1
16
80
8
57
21
19
21
37
1.95

Tables:   1

The End!