Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011560.1 Corchorus capsularis cultivar CVL-1 contig11581, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8517

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--34
2
17.0
2
93
0
59
47
0
2
50
1.16
1268--1315
23
2.0
24
84
11
64
50
2
2
45
1.25
5202--5390
98
1.9
98
97
0
360
38
11
12
37
1.80
5527--6483
200
4.9
197
81
7
1060
34
12
18
35
1.88
7102--7162
32
1.9
32
100
0
122
47
3
1
47
1.28
7463--7497
15
2.4
15
90
4
54
54
0
2
42
1.15
8395--8420
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!