Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011562.1 Corchorus capsularis cultivar CVL-1 contig11583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6994

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
540--648
33
3.3
33
79
5
148
24
11
21
43
1.85
534--673
66
2.1
66
94
0
244
27
10
20
42
1.84
685--806
33
3.7
33
87
0
154
32
10
17
39
1.84
1184--2516
667
2.0
666
96
0
2450
28
16
22
31
1.96
3043--3076
9
3.7
9
88
7
50
85
0
0
14
0.60
4536--4640
33
3.2
33
78
5
113
23
10
20
44
1.83
4666--4774
33
3.3
33
94
0
191
27
11
17
44
1.82
5152--5210
30
2.0
30
90
6
93
30
16
30
22
1.96
5745--6378
317
2.0
315
83
7
813
29
12
23
34
1.92
6492--6573
30
2.6
31
79
12
96
30
9
17
42
1.81

Tables:   1

The End!