Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011564.1 Corchorus capsularis cultivar CVL-1 contig11585, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36004

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3561--3725
31
5.5
31
65
16
94
33
16
21
28
1.95
3566--3726
60
2.7
60
88
0
241
34
16
21
27
1.95
3759--3890
31
4.3
31
76
11
128
25
19
17
37
1.93
3790--3950
60
2.7
59
90
3
243
26
19
18
36
1.94
3818--3919
29
3.5
28
69
15
89
27
18
19
34
1.95
14819--14858
18
2.2
18
86
8
55
40
20
7
32
1.80
21260--21286
13
2.1
13
100
0
54
59
0
0
40
0.98
32893--32961
34
2.0
34
100
0
138
28
8
20
42
1.82

Tables:   1

The End!