Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011565.1 Corchorus capsularis cultivar CVL-1 contig11586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11895

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2162--2298
69
2.0
71
91
5
226
45
16
16
22
1.85
4583--4624
4
10.0
4
85
10
57
78
21
0
0
0.75
4582--4624
8
5.0
9
86
8
63
79
20
0
0
0.74
4577--4623
22
2.1
23
88
11
80
82
17
0
0
0.66
4581--4619
18
2.2
18
90
9
62
82
17
0
0
0.68
10047--10084
11
3.5
11
89
10
51
39
0
2
57
1.12

Tables:   1

The End!