Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011575.1 Corchorus capsularis cultivar CVL-1 contig11596, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39696

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6905--6965
19
3.2
19
76
0
68
24
1
3
70
1.11
8137--8186
25
2.1
24
82
14
59
16
14
24
46
1.83
12921--13295
194
1.9
194
98
0
723
32
19
16
32
1.94
13449--13546
51
1.9
51
100
0
196
46
10
20
22
1.80
13534--13647
56
2.0
60
89
8
182
34
14
21
28
1.94
15303--15558
127
2.0
127
94
0
449
42
16
16
25
1.88
18346--18406
29
2.1
29
100
0
122
49
3
37
9
1.52
19768--19905
31
4.5
31
83
1
152
34
25
20
19
1.96
20433--20457
4
6.2
4
100
0
50
76
0
24
0
0.80
26578--26612
18
1.9
18
94
0
61
80
2
17
0
0.84
32927--32992
33
2.0
33
100
0
132
33
21
12
33
1.90

Tables:   1

The End!