Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011577.1 Corchorus capsularis cultivar CVL-1 contig11598, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36871

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2332--2361
6
5.2
6
96
4
53
86
0
0
13
0.57
2459--2531
33
2.2
32
80
7
85
10
32
38
17
1.85
14755--14795
5
8.6
5
81
10
50
0
17
0
82
0.66
14755--14795
14
2.9
14
85
3
55
0
17
0
82
0.66
20047--20076
13
2.3
13
100
0
60
86
0
13
0
0.57
29073--29232
82
2.0
81
80
6
180
30
26
5
38
1.77
34325--34352
5
5.6
5
100
0
56
82
0
0
17
0.68

Tables:   1

The End!