Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011583.1 Corchorus capsularis cultivar CVL-1 contig11604, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14536

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
511--549
17
2.3
17
86
0
51
25
0
2
71
0.98
1431--1466
14
2.6
14
86
13
56
66
0
5
27
1.13
1900--1928
15
1.9
15
100
0
58
41
27
13
17
1.87
2730--2807
30
2.5
31
80
10
97
37
17
16
28
1.92
2969--3076
53
2.0
57
83
7
143
19
18
13
48
1.81
5358--5427
4
17.8
4
79
2
70
41
10
0
48
1.36
5358--5427
6
11.8
6
89
3
70
41
10
0
48
1.36
7516--7672
84
1.9
83
93
4
271
36
10
1
50
1.47
8474--8518
2
22.5
2
90
0
72
51
4
0
44
1.21

Tables:   1

The End!