Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011596.1 Corchorus capsularis cultivar CVL-1 contig11617, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  61563

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14876--14961
42
2.0
42
81
0
100
24
8
3
63
1.37
18488--21000
841
3.0
839
97
0
4816
30
10
17
41
1.83
39263--39386
33
3.7
33
82
6
142
8
27
40
23
1.84
46369--46544
95
1.9
95
93
2
309
40
27
13
18
1.88
61068--61146
26
2.9
28
79
9
92
20
13
22
43
1.87
61330--61367
18
2.1
18
100
0
76
21
10
23
44
1.83

Tables:   1

The End!