Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001160.1 Corchorus capsularis cultivar CVL-1 contig01160, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12139

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1574--1618
16
2.8
16
74
12
56
13
6
33
46
1.69
2082--2153
31
2.3
31
75
17
78
61
8
4
26
1.43
3074--3117
20
2.1
21
83
8
54
59
9
4
27
1.48
4044--4083
6
7.0
6
83
11
57
32
0
15
52
1.43
4894--5198
156
2.0
156
95
0
547
34
14
18
32
1.91
9192--9220
2
14.5
2
100
0
58
48
0
0
51
1.00

Tables:   1

The End!