Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011606.1 Corchorus capsularis cultivar CVL-1 contig11627, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8750

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
473--580
33
3.3
33
78
2
101
9
28
38
23
1.85
4960--5066
33
3.2
33
81
7
119
23
40
28
8
1.83
4960--5096
33
4.2
32
82
7
114
22
40
27
9
1.85
5042--5104
33
1.9
33
87
6
92
22
41
25
11
1.86
5882--6455
159
3.6
158
90
3
911
27
22
21
29
1.99
7259--7310
10
4.9
10
77
13
59
5
21
48
25
1.72
7260--7377
33
3.5
33
82
6
130
6
26
43
23
1.79

Tables:   1

The End!