Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011613.1 Corchorus capsularis cultivar CVL-1 contig11634, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20769

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3360--3411
3
17.0
3
96
4
95
65
0
0
34
0.93
4897--4926
13
2.3
13
94
0
51
40
3
13
43
1.60
4846--4972
68
1.9
68
93
3
220
44
14
11
28
1.81
5993--6045
26
2.0
26
85
3
70
39
24
15
20
1.91
8728--8778
21
2.6
19
84
9
59
13
7
1
76
1.09
11476--11509
16
2.1
16
100
0
68
26
0
61
11
1.30
13530--13562
14
2.4
14
94
0
57
36
3
27
33
1.72
18690--18779
45
2.1
43
91
6
146
40
22
3
34
1.70
19695--19760
23
2.9
22
84
6
78
63
6
0
30
1.18
20113--20175
33
1.9
33
93
0
108
25
6
28
39
1.80

Tables:   1

The End!