Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011617.1 Corchorus capsularis cultivar CVL-1 contig11638, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2953

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2220--2279
27
2.2
27
87
0
84
46
20
15
18
1.84
2530--2815
58
4.8
58
74
10
197
41
13
20
24
1.88
2633--2862
60
3.6
64
80
5
288
43
14
18
23
1.87
2633--2860
64
3.6
63
79
5
246
42
14
18
23
1.87
2633--2876
65
3.9
64
75
6
147
42
15
18
23
1.88

Tables:   1

The End!