Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011618.1 Corchorus capsularis cultivar CVL-1 contig11639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12574

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
444--503
27
2.2
27
84
0
75
50
16
15
18
1.79
4038--4134
33
2.9
33
85
0
122
20
38
29
11
1.88
4058--4178
33
3.7
32
78
10
104
22
41
25
10
1.86
4091--4181
33
2.8
33
83
6
114
23
41
24
10
1.86
7201--7259
31
1.9
31
93
3
102
16
27
22
33
1.95
10474--10592
33
3.5
33
80
8
125
7
26
42
24
1.81

Tables:   1

The End!