Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011623.1 Corchorus capsularis cultivar CVL-1 contig11644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17630

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--133
22
3.9
22
73
18
79
54
4
17
21
1.60
44--144
43
2.4
42
76
16
109
52
4
20
20
1.65
206--253
13
3.6
13
73
15
53
62
0
25
12
1.30
197--252
27
2.0
28
89
3
87
60
0
23
16
1.35
3011--3036
13
2.0
13
100
0
52
46
0
23
30
1.53
8258--8304
21
2.2
22
92
3
78
65
8
17
8
1.44

Tables:   1

The End!