Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011624.1 Corchorus capsularis cultivar CVL-1 contig11645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29548

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
168--201
2
17.0
2
93
0
59
50
2
0
47
1.16
6458--6509
26
2.0
27
92
3
88
25
17
26
30
1.97
6808--7097
156
1.9
156
85
2
404
33
19
15
31
1.93
8176--8201
3
8.7
3
100
0
52
34
0
0
65
0.93
9202--9226
2
12.5
2
100
0
50
48
0
0
52
1.00
10255--10361
53
2.0
53
92
0
178
39
6
12
42
1.68
11091--11208
59
2.0
59
100
0
236
47
10
8
33
1.68
16136--16167
2
16.5
2
93
6
57
50
0
0
50
1.00
23491--23525
13
2.7
13
95
0
61
22
5
8
62
1.45

Tables:   1

The End!