Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01011627.1 Corchorus capsularis cultivar CVL-1 contig11648, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5968

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
354--393
20
2.1
21
82
17
52
30
37
5
27
1.78
354--393
18
2.1
20
86
9
57
30
37
5
27
1.78
2568--2740
84
2.1
84
98
0
337
39
12
17
30
1.87
3349--3450
37
2.8
36
71
12
93
37
22
19
20
1.95
4472--4512
16
2.5
17
84
4
57
0
24
0
75
0.80
5262--5295
17
1.9
18
94
5
61
17
0
0
82
0.67
5566--5594
2
14.5
2
100
0
58
51
0
0
48
1.00

Tables:   1

The End!