Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001163.1 Corchorus capsularis cultivar CVL-1 contig01163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12242

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3946--4005
29
2.1
29
100
0
120
26
28
28
16
1.97
4122--4186
30
2.2
29
88
2
94
23
18
10
47
1.79
4122--4186
29
2.2
30
86
8
89
23
18
10
47
1.79
6262--6288
2
13.5
2
100
0
54
51
0
0
48
1.00
8365--8400
13
2.8
13
87
12
56
52
2
0
44
1.15

Tables:   1

The End!